OMAT1P018310
with_AGI_gene
0.72419900000000003715
<html><body><title>OMAT1P018310</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u100183100000i/OMAT1P018310.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u100183100000i/OMAT1P018310.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u100183100000i/OMAT1P018310.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400043100000i">OMAT4P004310</a></td><td>0.953522</td><td>-</td><td>AT4G15430</td><td>FUNCTIONS IN: molecular_function unknown</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u201058600000i">OMAT2P105860</a></td><td>0.945445</td><td>-</td><td>AT2G28900</td><td>ATOEP16-1 (OUTER PLASTID ENVELOPE PROTEIN 16-1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200075100000i">OMAT2P007510</a></td><td>0.94463</td><td>-</td><td>AT2G31380</td><td>STH</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500124000000i">OMAT5P012400</a></td><td>0.938127</td><td>-</td><td>AT5G44530</td><td>subtilase family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301143600000i">OMAT3P114360</a></td><td>0.938111</td><td>-</td><td>AT3G57930</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101001400000i">OMAT1P100140</a></td><td>0.937972</td><td>-</td><td>AT1G01420</td><td>UGT72B3 (UDP-GLUCOSYL TRANSFERASE 72B3)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101093000000i">OMAT1P109300</a></td><td>0.937705</td><td>-</td><td>AT1G29420,AT1G29430</td><td>[AT1G29420]FUNCTIONS IN: molecular_function unknown, [AT1G29430]auxin-responsive family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100142300000i">OMAT1P014230</a></td><td>0.934271</td><td>-</td><td>AT1G51610</td><td>cation efflux family protein / metal tolerance protein, putative (MTPc4)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400107400000i">OMAT4P010740</a></td><td>0.931685</td><td>-</td><td>AT4G32190</td><td>centromeric protein-related</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u101130500000i">OMAT1P113050</a></td><td>0.930356</td><td>-</td><td>AT1G53035</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500194000000i">OMAT5P019400</a></td><td>-0.634972</td><td>-</td><td>AT5G63260</td><td>zinc finger (CCCH-type) family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u301010000000i">OMAT3P101000</a></td><td>-0.612004</td><td>-</td><td>AT3G03330</td><td>short-chain dehydrogenase/reductase (SDR) family protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200116000000i">OMAT2P011600</a></td><td>-0.60649</td><td>-</td><td>AT2G42680</td><td>MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500119700000i">OMAT5P011970</a></td><td>-0.600408</td><td>-</td><td>AT5G43280</td><td>ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u100129600000i">OMAT1P012960</a></td><td>-0.599957</td><td>-</td><td>AT1G47310</td><td>unknown protein</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200109100000i">OMAT2P010910</a></td><td>-0.596244</td><td>-</td><td>AT2G40830</td><td>RHC1A</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400127400000i">OMAT4P012740</a></td><td>-0.594688</td><td>-</td><td>AT4G36960,AtU56</td><td>[AT4G36960]RNA recognition motif (RRM)-containing protein, [AtU56]AtU56</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u200133800000i">OMAT2P013380</a></td><td>-0.589125</td><td>-</td><td>AT2G46800</td><td>ZAT (ZINC TRANSPORTER OF ARABIDOPSIS THALIANA)</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u400053600000i">OMAT4P005360</a></td><td>-0.587498</td><td>-</td><td>AT4G17940</td><td>binding</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s1ria00227u500147800000i">OMAT5P014780</a></td><td>-0.583162</td><td>-</td><td>AT5G51450</td><td>RIN3 (RPM1 INTERACTING PROTEIN 3)</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s1i/cria227s1ria227u100183100000i/OMAT1P018310-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.79e-19</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.79e-19 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>5</td><td>GO:0009733</td><td>response to auxin stimulus</td><td>11/200</td><td>6.51</td><td>1.56e-07</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0009628</td><td>response to abiotic stimulus</td><td>22/200</td><td>2.97</td><td>1.65e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0009266</td><td>response to temperature stimulus</td><td>11/200</td><td>4.83</td><td>3.62e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0006950</td><td>response to stress</td><td>29/200</td><td>2.34</td><td>6.55e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=response%20stress">2.13E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0009719</td><td>response to endogenous stimulus</td><td>16/200</td><td>3.10</td><td>1.88e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009725</td><td>response to hormone stimulus</td><td>15/200</td><td>3.17</td><td>2.45e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050794</td><td>regulation of cellular process</td><td>31/200</td><td>2.03</td><td>5.34e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006952</td><td>defense response</td><td>14/200</td><td>3.08</td><td>5.97e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0042221</td><td>response to chemical stimulus</td><td>25/200</td><td>2.19</td><td>7.68e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0050789</td><td>regulation of biological process</td><td>33/200</td><td>1.91</td><td>1.09e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010556</td><td>regulation of macromolecule biosynthetic process</td><td>22/200</td><td>2.23</td><td>1.45e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0010033</td><td>response to organic substance</td><td>17/200</td><td>2.54</td><td>1.45e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0080090</td><td>regulation of primary metabolic process</td><td>23/200</td><td>2.18</td><td>1.49e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0009889</td><td>regulation of biosynthetic process</td><td>22/200</td><td>2.19</td><td>1.92e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0031326</td><td>regulation of cellular biosynthetic process</td><td>22/200</td><td>2.19</td><td>1.92e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0031323</td><td>regulation of cellular metabolic process</td><td>23/200</td><td>2.13</td><td>2.21e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0060255</td><td>regulation of macromolecule metabolic process</td><td>23/200</td><td>2.10</td><td>2.64e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006796</td><td>phosphate metabolic process</td><td>16/200</td><td>2.41</td><td>3.96e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006793</td><td>phosphorus metabolic process</td><td>16/200</td><td>2.41</td><td>4.00e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0010468</td><td>regulation of gene expression</td><td>22/200</td><td>2.06</td><td>4.44e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=regulation%20gene%20expression">1.01E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0019219</td><td>regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process</td><td>21/200</td><td>2.09</td><td>4.76e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0051171</td><td>regulation of nitrogen compound metabolic process</td><td>21/200</td><td>2.07</td><td>5.45e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006350</td><td>transcription</td><td>21/200</td><td>2.06</td><td>6.04e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=transcription">1.02E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0019222</td><td>regulation of metabolic process</td><td>23/200</td><td>1.95</td><td>7.47e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006464</td><td>protein modification process</td><td>20/200</td><td>1.92</td><td>1.83e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0043412</td><td>macromolecule modification</td><td>20/200</td><td>1.76</td><td>4.95e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0005975</td><td>carbohydrate metabolic process</td><td>11/200</td><td>2.11</td><td>6.45e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>47/200</td><td>1.72</td><td>6.00e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=membrane">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0005886</td><td>plasma membrane</td><td>25/200</td><td>2.02</td><td>2.85e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=plasma%20membrane">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>115/200</td><td>1.26</td><td>3.24e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=cell%20part">2.86E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0031224</td><td>intrinsic to membrane</td><td>11/200</td><td>2.05</td><td>8.07e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>M</td><td>3</td><td>GO:0003700</td><td>transcription factor activity</td><td>26/200</td><td>2.57</td><td>3.29e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0003677</td><td>DNA binding</td><td>29/200</td><td>2.09</td><td>5.27e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=binding">6.70E-19</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0016740</td><td>transferase activity</td><td>30/200</td><td>1.83</td><td>4.23e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=transferase%20activity">7.54E-17</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0016301</td><td>kinase activity</td><td>18/200</td><td>2.24</td><td>4.90e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0016773</td><td>phosphotransferase activity, alcohol group as acceptor</td><td>14/200</td><td>2.26</td><td>1.54e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016772</td><td>transferase activity, transferring phosphorus-containing groups</td><td>18/200</td><td>1.96</td><td>2.24e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>145/200</td><td>1.97</td><td>1.41e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>160/200</td><td>1.74</td><td>8.41e-24</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>146/200</td><td>1.89</td><td>1.08e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>150/200</td><td>1.82</td><td>5.34e-23</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>151/200</td><td>1.79</td><td>1.88e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>154/200</td><td>1.74</td><td>4.99e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>159/200</td><td>1.69</td><td>9.76e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>159/200</td><td>1.69</td><td>9.76e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>166/200</td><td>1.62</td><td>1.06e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>169/200</td><td>1.56</td><td>2.07e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>153/200</td><td>1.70</td><td>2.17e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>158/200</td><td>1.64</td><td>8.62e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>159/200</td><td>1.63</td><td>9.42e-20</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=seed">3.72E-17</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>138/200</td><td>1.81</td><td>1.69e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>159/200</td><td>1.62</td><td>1.79e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>159/200</td><td>1.62</td><td>1.79e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>164/200</td><td>1.57</td><td>3.19e-19</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=inflorescence">2.20E-18</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>163/200</td><td>1.57</td><td>6.36e-19</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=flower">1.14E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>141/200</td><td>1.75</td><td>8.88e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>138/200</td><td>1.78</td><td>1.36e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>142/200</td><td>1.69</td><td>2.09e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>149/200</td><td>1.61</td><td>8.64e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>142/200</td><td>1.65</td><td>2.92e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>143/200</td><td>1.63</td><td>5.65e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>139/200</td><td>1.66</td><td>9.19e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>130/200</td><td>1.60</td><td>1.04e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>137/200</td><td>1.52</td><td>5.44e-12</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=root">1.43E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>117/200</td><td>1.41</td><td>4.12e-07</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>21/200</td><td>1.76</td><td>4.21e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>20/200</td><td>1.77</td><td>4.63e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>20/200</td><td>1.76</td><td>4.98e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>20/200</td><td>1.76</td><td>5.06e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>19/200</td><td>1.77</td><td>5.80e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>19/200</td><td>1.76</td><td>6.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>19/200</td><td>1.76</td><td>6.19e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>21/200</td><td>1.70</td><td>6.49e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>21/200</td><td>1.70</td><td>6.53e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>19/200</td><td>1.71</td><td>8.22e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>19/200</td><td>1.70</td><td>8.84e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>156/200</td><td>1.85</td><td>5.73e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>156/200</td><td>1.85</td><td>5.89e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>156/200</td><td>1.84</td><td>1.40e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>144/200</td><td>1.87</td><td>1.25e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>144/200</td><td>1.87</td><td>1.33e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>158/200</td><td>1.60</td><td>1.17e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>163/200</td><td>1.56</td><td>1.49e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>160/200</td><td>1.57</td><td>3.31e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>154/200</td><td>1.59</td><td>3.14e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>142/200</td><td>1.58</td><td>2.73e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>142/200</td><td>1.57</td><td>4.16e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>133/200</td><td>1.62</td><td>9.60e-14</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>128/200</td><td>1.61</td><td>1.28e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>131/200</td><td>1.58</td><td>2.16e-12</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>130/200</td><td>1.58</td><td>3.12e-12</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>response</td><td>-</td><td>42/200</td><td>2.34</td><td>5.49e-08</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=response">3.49E-15</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>responsive</td><td>-</td><td>13/200</td><td>4.34</td><td>2.22e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>50/200</td><td>1.88</td><td>2.67e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=membrane">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>plasma</td><td>-</td><td>26/200</td><td>2.27</td><td>3.17e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=plasma">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>carbohydrate</td><td>-</td><td>13/200</td><td>3.32</td><td>4.51e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>regulation</td><td>-</td><td>28/200</td><td>2.12</td><td>5.69e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=regulation">1.97E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stimulus</td><td>-</td><td>13/200</td><td>3.02</td><td>1.21e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transcription</td><td>-</td><td>29/200</td><td>2.00</td><td>1.23e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=transcription">1.02E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr000719</td><td>-</td><td>16/200</td><td>2.57</td><td>1.90e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr002290</td><td>-</td><td>10/200</td><td>3.39</td><td>2.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>threonine</td><td>-</td><td>18/200</td><td>2.40</td><td>2.05e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>defense</td><td>-</td><td>11/200</td><td>3.15</td><td>2.23e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr017442</td><td>-</td><td>14/200</td><td>2.66</td><td>2.92e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr011009</td><td>-</td><td>16/200</td><td>2.47</td><td>2.92e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>kinase</td><td>-</td><td>22/200</td><td>2.08</td><td>3.89e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>phosphorylation</td><td>-</td><td>15/200</td><td>2.44</td><td>4.91e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>serine</td><td>-</td><td>19/200</td><td>2.13</td><td>6.59e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=serine">8.00E-05</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>tyrosine</td><td>-</td><td>10/200</td><td>2.82</td><td>9.54e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr008271</td><td>-</td><td>12/200</td><td>2.46</td><td>1.35e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>superfamily</td><td>-</td><td>10/200</td><td>2.64</td><td>1.61e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>leucine</td><td>-</td><td>12/200</td><td>2.29</td><td>2.55e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>factor</td><td>-</td><td>29/200</td><td>1.66</td><td>2.57e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>amino</td><td>-</td><td>17/200</td><td>1.97</td><td>2.66e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=amino">1.80E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>subgroup</td><td>-</td><td>10/200</td><td>2.46</td><td>2.74e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>stress</td><td>-</td><td>11/200</td><td>2.34</td><td>2.84e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=stress">7.86E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>active</td><td>-</td><td>16/200</td><td>1.95</td><td>3.70e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT1G65960&keyword=active">1.35E-15</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>glycosyl</td><td>-</td><td>10/200</td><td>2.35</td><td>3.96e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr017441</td><td>-</td><td>10/200</td><td>2.33</td><td>4.17e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transporter</td><td>-</td><td>14/200</td><td>2.01</td><td>4.46e-03</td><td>-</td><td>no</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>